bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3400_orf1 Length=173 Score E Sequences producing significant alignments: (Bits) Value 5833.PFE0545c 187 1e-46 > 5833.PFE0545c Length=171 Score = 187 bits (474), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 88/171 (51%), Positives = 123/171 (71%), Gaps = 0/171 (0%) Query 3 MKVYKCVFSGDELCSDSYPHLVPFDDDAFKDVAFEVKGTRVTKAAEDFGIADNSEEGEGG 62 MKV+K VF+ DE+CSDSY PF+ F+++AFEVK + K ED+GIADNSE+ G Sbjct 1 MKVFKDVFTNDEVCSDSYVQQDPFEVPEFREIAFEVKSNKRIKGNEDYGIADNSEDAVEG 60 Query 63 VEDAAETVIDIINAFHLSETSLTKKDFTTYIKGYLKRVVDYLQEHNPSRVEAFKTESAAL 122 + E VIDI+++F L+ T+ +KK+++ YIK Y+++V YL+E P RVE FKT++ Sbjct 61 MGADVEHVIDIVDSFQLTSTAFSKKEYSAYIKNYMQKVAKYLEEKKPDRVEIFKTKAQPF 120 Query 123 VKKILGSFDDFQFFMSESNDFEASLVYAYYKDEETAPRFIYLKDGLKEEKY 173 +K IL +FDDF+F+M ES D EA ++Y+YYK EE PRF+Y+ DGL EEKY Sbjct 121 IKHILTNFDDFEFYMGESLDMEAGIIYSYYKGEEITPRFVYISDGLFEEKY 171 Lambda K H 0.316 0.135 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 33476963958 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40