bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3484_orf1 Length=195 Score E Sequences producing significant alignments: (Bits) Value 5833.PF13_0226 150 2e-35 > 5833.PF13_0226 Length=462 Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 64/106 (60%), Positives = 85/106 (80%), Gaps = 0/106 (0%) Query 90 LWTWSRDGRLKLTCEQPIVPVPVIQEIHRRDKIIEVPQVDVVDAVKPRVYNQGVEHEVPK 149 LW+W+ DG+LKL C QPI+PV V+Q I RRDKII +PQV+V D V P+VYNQ ++H+VP Sbjct 131 LWSWTNDGKLKLLCSQPIIPVSVVQGILRRDKIILIPQVEVTDVVIPKVYNQNIKHDVPT 190 Query 150 MRIDAQPVNIEIPKYKYVEREVLVPIVTGYTHKFVPKWEIREVPRP 195 + I+ N+ IP KYV++E+++PI+TGYTHKFVPKW+I EVPRP Sbjct 191 LNIEIMKSNVNIPNVKYVDKEIIIPIITGYTHKFVPKWDIHEVPRP 236 Lambda K H 0.317 0.136 0.430 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 45508314650 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40