bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3488_orf1 Length=155 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd3_200 79.0 4e-14 > 5807.cgd3_200 Length=402 Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 10/159 (6%) Query 6 RFGSRCRYAHAIECVGYQEEAHGGKSVRCCVVNPAAS---EIFTGGKDKKLMRWQITQAA 62 +FG C Y+H + V ++AH G +RC + +P + E+FTGG D +L RW I A Sbjct 38 KFGQNCNYSHILRQVAQIQKAHFG-GIRCAISSPLPTGELELFTGGCDGQLKRWIIRPAD 96 Query 63 PQGPGGNGGAGAAG---NFGGEL--DSSGEPLLGLSCLTCTDLGAEVCCLKMLGGALFAG 117 G+ N+ + D SG L + + + AEVC + G LF G Sbjct 97 KDVMTTEPERGSNHRRRNYQNKFQNDVSGATQLSVKMDSAINCSAEVCSCLIYGDVLFCG 156 Query 118 LADGRIKAFL-ANGDVKELQGHSKSVYCLLLVEGVLVSG 155 L +G I+AF G+ +L GH++ ++ LL+++ +LVS Sbjct 157 LINGTIRAFHKPTGNFTDLVGHNQEIHQLLIIDNILVSA 195 Lambda K H 0.320 0.139 0.436 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23746592502 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40