bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3501_orf2 Length=163 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd7_1180 112 5e-24 > 5807.cgd7_1180 Length=227 Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 72/161 (44%), Positives = 103/161 (63%), Gaps = 11/161 (6%) Query 2 MWIGNIGKKSAAFINHKPFHPGNYQNQEKVWLAEQKLKEEQKKERELEERRREEVKIEEL 61 M + I K++ F+NHK FHPGN +N+EKVWLAE+KLKEE++K+ EL ++R++E +IEEL Sbjct 1 MNVQRISNKASVFLNHKHFHPGNSKNREKVWLAEEKLKEEERKQEELLKKRKKEWEIEEL 60 Query 62 RRALR-GEAKAAQQLQKKEEAVSPAEELRQKAREAARLQALHRKQQEAQQRLKQPAKSTL 120 RR LR K QL+ + E EE+ K+++ LH + + K KS L Sbjct 61 RRDLRQSNKKVKNQLKVQSE----VEEVIDKSKQ------LHDVLVDKARANKSWVKSEL 110 Query 121 YDEDILTLGHTSVFGSFYSKQEDKWGYKCCGCLDRSAVCTA 161 Y+ED+ H+SV+GS+Y KWG+KCC L RS+VC+A Sbjct 111 YEEDVFLGNHSSVWGSYYDPNVKKWGFKCCKNLKRSSVCSA 151 Lambda K H 0.313 0.127 0.367 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 28009217385 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40