bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3526_orf2 Length=146 Score E Sequences producing significant alignments: (Bits) Value 4952.YALI0F20856g 100 9e-21 > 4952.YALI0F20856g Length=153 Score = 100 bits (250), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 56/126 (44%), Positives = 82/126 (65%), Gaps = 14/126 (11%) Query 31 SGMPVNESCVTTFNELKLRHSFKWIIFKID--HDEIVVEKKGTGDA-STLTKELPASDCR 87 SG+ VN+S + FNELKL +II+KI+ EIVVE++GT D+ T +LP +DCR Sbjct 14 SGVAVNDSALQAFNELKLGKKVTFIIYKINDAKTEIVVEEEGTTDSYDTFLGKLPENDCR 73 Query 88 YAVYD--------EGQR--IHFILWSPDCAPVKPRMIYSSSKDALAKKLEGTVATTLEAH 137 YAVYD EG+R + F WSPD APV+ +MIY+SSKD+L + L G ++T ++ Sbjct 74 YAVYDFEYEISSGEGKRSKLVFFTWSPDTAPVRSKMIYASSKDSLRRALTG-ISTEIQGT 132 Query 138 ELGDLS 143 + +++ Sbjct 133 DFSEVA 138 Lambda K H 0.321 0.135 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22393349475 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40