bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3567_orf3 Length=191 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0151 81.6 1e-14 > 5833.PF14_0151 Length=337 Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 42/141 (29%), Positives = 80/141 (56%), Gaps = 9/141 (6%) Query 59 VKLLIDPALANSLIGKESATITRVAEECGCSMHVLSSKNKFPESTDRILLMSGSTESIST 118 VKLLI+ +A S+IGK + IT + + GCS+ + + + FP + +R+L++ G + I Sbjct 21 VKLLINNLVAGSVIGKHGSIITSIENKTGCSLKLSPNNSYFPNTQERVLVLCGKIDQIKD 80 Query 119 GIIALLERCKEV---HPNLPYDQMYA------KLVVPTSVCPTVIGPGGTRVREIREATL 169 ++ +L++ KEV H + + M ++VVP S +IG GG ++++++++T Sbjct 81 ALLIILDKIKEVANQHSHEKQNMMNGAAKYTCRIVVPKSAVSAIIGKGGQQIKQLQDSTG 140 Query 170 TRITVDRNSSPCPERIIAVHG 190 ++I + ERII + G Sbjct 141 SKIQISSREDGLNERIITIIG 161 Lambda K H 0.316 0.133 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 43048405750 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40