bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3618_orf2 Length=228 Score E Sequences producing significant alignments: (Bits) Value 44689.DDB_0191460 139 6e-32 > 44689.DDB_0191460 Length=1387 Score = 139 bits (350), Expect = 6e-32, Method: Composition-based stats. Identities = 79/223 (35%), Positives = 122/223 (54%), Gaps = 23/223 (10%) Query 22 ETEDTEKEHVICRNVLPPFLKDYK---PSDRIISVVKDDTSDLANLARKGSALLRYTRDA 78 + +D + +++ N +PPFL ++ R + VKD TSD+A ++RKGSAL++ R+ Sbjct 509 QEDDENRVNLLVHNTIPPFLDGHQVLTKQQRAVQTVKDPTSDMAVISRKGSALMKEFREK 568 Query 79 TDRAAVRQRFWEVAGSTLGKLMQGSAAAAAAEEESAAAAAAAAAAAGTRE---------- 128 DR +++ WE+ G+ +GK+M G + E+E A +E Sbjct 569 RDRIKSQKKVWELGGTAIGKIM-GIKSEDEKEKEQQLANGGGGGEQIDKETGEVLNYKAQ 627 Query 129 SYAAAFLQAGKASGAGSGSSSSSKTMQEQRESLPVFKVRNEFLALCREHQILIVVGETGS 188 S A+ L K + GS S +KT++EQRE LP+F RN+ + + RE+ ++I+VGETGS Sbjct 628 SQFASHLTPNKPT-EGSSEFSKTKTIKEQREFLPIFGCRNDLMKIIRENNVIIIVGETGS 686 Query 189 GKTTQLTQYLLEDGYAR--------PAAAAAAAAAAEAHPEAA 223 GKTTQL QYL EDGY++ P AA + A E + Sbjct 687 GKTTQLVQYLYEDGYSKFGKIGCTQPRRVAAVSVAKRVSEEMS 729 Lambda K H 0.311 0.124 0.338 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 63182849288 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40