bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3647_orf2 Length=197 Score E Sequences producing significant alignments: (Bits) Value 5833.PFI1625c 256 3e-67 > 5833.PFI1625c Length=484 Score = 256 bits (653), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 111/176 (63%), Positives = 146/176 (82%), Gaps = 0/176 (0%) Query 22 DVVAFMLMQAIIGSYRKHEEGLVPGKLSANTTVRNIATKMQTGCAEMFSAFNTCYRDTGL 81 D + FMLMQ IIG+Y+K+EEG++PGKLSAN TV NI KM GCA+ F++FNTCY +TGL Sbjct 298 DSITFMLMQCIIGTYKKNEEGILPGKLSANRTVNNICNKMTVGCADYFTSFNTCYNNTGL 357 Query 82 FGFYAQCDEVAVEHCVLDLMHGITALSYSVTDEEVERAKAQLTTQLLGHLDSTTSVAEDL 141 FGFY QCDE+AVEH + +LM G+T+LSYS+TDEEVE AK L TQL+ +S++++AE++ Sbjct 358 FGFYVQCDEIAVEHALGELMFGVTSLSYSITDEEVELAKIHLKTQLISMFESSSTLAEEV 417 Query 142 GRQILVYGRHVPTAEFLMRLNAIDADEIKRVAWKYLHDKEVAVSAMGPLHGMPQLI 197 RQ+LVYGR + AEF++RLN ID +E+KRVAWKYLHD+++AV+A+G LHGMPQ I Sbjct 418 SRQLLVYGRKISLAEFILRLNEIDTEEVKRVAWKYLHDRDIAVAAIGALHGMPQYI 473 Lambda K H 0.323 0.136 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 46738269100 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40