bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3650_orf1 Length=175 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0195 70.9 2e-11 > 5833.PF14_0195 Length=1449 Score = 70.9 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 15/148 (10%) Query 29 LKSLYGDQILPTAFNLKGRLLENGCSAQVATNFLSYYKQMKDTCVVDCVSSSSSSSSSSG 88 L+SLY D+ILP FN+KGR E + N + Y + ++ + SG Sbjct 1193 LESLYEDRILPLLFNIKGRADEYEYREILRNNIKTAYSLYPEKYII--------KPNESG 1244 Query 89 SSGGSSREPVVYLLLPPPDHRGWIDANDPNDPYPTLMWESFFEFIQSSAFSQCSRL-RIG 147 + ++Y ++ N+ D Y + +W+ F E+++ + S+ + L Sbjct 1245 D------DYIIYFTNKKVSEDYFMSINNLKDIYSSNLWKQFEEYLEEISKSEDATLYTFS 1298 Query 148 GGRYGMACFLRRLDLPFFRAFSLGQLCH 175 GGRYGMA L++ +LPFF+ LGQLCH Sbjct 1299 GGRYGMAKELKKRNLPFFQGLFLGQLCH 1326 Lambda K H 0.321 0.136 0.453 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 34716851512 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40