bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3663_orf1 Length=200 Score E Sequences producing significant alignments: (Bits) Value 5833.PFD0430c 75.9 8e-13 > 5833.PFD0430c Length=842 Score = 75.9 bits (185), Expect = 8e-13, Method: Composition-based stats. Identities = 50/191 (26%), Positives = 85/191 (44%), Gaps = 9/191 (4%) Query 3 GRPPKDPSNPQELSQWEKSVAALPMPVQYQLQPLTRLL-PQHLHAAYRSASSFYSQAFGY 61 G P KD + + L +W K+V PMP+ +L P++ L +Y A +YS+ +G Sbjct 512 GNPIKDVTKEENLFEWSKTVTNHPMPINIKLTPISDSFDSDDLKESYDKAIIYYSRLYGL 571 Query 62 NKDDLALLTGSSEAITDVLRSSSTVVWAGPAPGFVDCPKGKKILFGFAAQLSMDANGPPL 121 + D + + I +L ++ TV P CP GK ++FGF+ + + N L Sbjct 572 SPHD--TMQKDDKDIIKILTNADTVTKNSAPPINAQCPHGKVVMFGFSLKQNFWDNTNAL 629 Query 122 A---IKSCQNGSHRC---EGTSTTSGEARIWAVCGDKPITSLETYSVVDPLPETAVGCSQ 175 I+ C+ GS+ C +G+S + ++ CGD+P+ E V C Sbjct 630 KGYNIEVCEAGSNSCTSKQGSSNKYDTSYLYMECGDQPLPFSEQVISESTSTYNTVKCPN 689 Query 176 GKEALFGLQLT 186 L G ++ Sbjct 690 DYSILLGFGIS 700 Lambda K H 0.315 0.130 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 47774528022 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40