bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3759_orf1 Length=248 Score E Sequences producing significant alignments: (Bits) Value 3702.AT4G22350.1 197 3e-49 > 3702.AT4G22350.1 Length=510 Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 110/217 (50%), Positives = 147/217 (67%), Gaps = 5/217 (2%) Query 27 DTFKYNLNPTYTPEDVARLSAEVFYGKSLDGADFLPGCVGLNNLSKTDFFAVIIQSLCTI 86 D ++ LNP ++ V L + ++LDG+D+LPG VGLNN+ KT+F V IQSL + Sbjct 162 DDIRHVLNPRFSRAQVNELDKNRQWSRALDGSDYLPGMVGLNNIQKTEFVNVTIQSLMRV 221 Query 87 IPLRNYLLLLDLSEKQKYNSVLKTLSELMRKIFNRRNFKGIVSPHEFLQAVGVESKKKFR 146 PLRN+ L+ + + K + + EL RKI++ RNFKG VSPHEFLQAV SKK+FR Sbjct 222 TPLRNFFLIPENYQHCK-SPLGHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFR 280 Query 147 IGEQSDPLALFAWLLNVLHRDQKDKKTGGSIIHDCFQGEV-LVTDAQSEEGR---KTPFL 202 IG+QSDP+ +WLLN LH D + K SIIH CFQGE+ +V + Q E + + PFL Sbjct 281 IGQQSDPVEFMSWLLNTLHMDLRTSKDASSIIHKCFQGELEVVKEYQGNENKEISRMPFL 340 Query 203 YLTLDLPPAPIFKDSLDRNMIPTVPIFDLLQKFDGET 239 L LDLPP P+FKD +++N+IP V +FDLL+KFDGET Sbjct 341 MLGLDLPPPPLFKDVMEKNIIPQVALFDLLKKFDGET 377 Lambda K H 0.321 0.138 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 74420426883 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40