bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_3881_orf3
Length=134
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd5_840 157 1e-37
> 5807.cgd5_840
Length=254
Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 94/126 (74%), Gaps = 0/126 (0%)
Query 5 SGGSVEYLHNHNNKPFIRGGDFGLRKSKGEQPMQLQYSRAFGGKDLKTYGLSAEPDVRVL 64
+GGSVEYL NHNNKPF+RGGDF R+++GE PMQLQYSRAFGGKDLK YGLS PD+ ++
Sbjct 124 NGGSVEYLQNHNNKPFLRGGDFTRRRARGETPMQLQYSRAFGGKDLKPYGLSCVPDISII 183
Query 65 RLSSSHKLMVLATDGLWDVLSATQAVQIAWDAQQQGENPAESLVQHALADQQQSGHCADN 124
L+ +++L ++ATDG+WD+LSA Q+ +++ +Q+ G PA LV L + + DN
Sbjct 184 SLNQNNRLFIIATDGIWDLLSAQQSCDLSFYSQELGIQPARYLVNAVLEETRNRNTNCDN 243
Query 125 ITAMVV 130
+TA+ +
Sbjct 244 LTAICI 249
Lambda K H
0.315 0.130 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22682284714
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40