bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3882_orf1 Length=238 Score E Sequences producing significant alignments: (Bits) Value 269800.Tfu_2505 324 2e-87 > 269800.Tfu_2505 Length=478 Score = 324 bits (830), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 154/246 (62%), Positives = 187/246 (76%), Gaps = 12/246 (4%) Query 1 CNIFSTQDHAAAAIAAEGSAT--------VFAWKGETVEEYWWCSEQALTWPDCAGPDLL 52 CNIFSTQDHAAAA+ T VFAWKGET+EEYWWC+EQALTWPD GP+++ Sbjct 77 CNIFSTQDHAAAAVVVGPDGTPDNPRGVPVFAWKGETLEEYWWCTEQALTWPDGEGPNMI 136 Query 53 VDDGGDITMLIHEGVHAEEVYESSGVLPEVSAAADEEAAAVQQLLRRSVAAAPRKWRQLA 112 +DDGGD TML+H+GV YE +G +P+ A EE V +LLRR++A PRKW ++A Sbjct 137 LDDGGDATMLVHKGVQ----YEKAGAVPDPDTADSEEFRIVLELLRRTLAENPRKWTEIA 192 Query 113 AGVRGVSEETTTGVLRLLRRAAANLLLFPAMNVNDCVTKSKFDNVYGCRHSLPDAIMRAT 172 + ++GV+EETTTGV RL + LLFPA+NVND VTKSKFDN YGCRHSL D I RAT Sbjct 193 SRIKGVTEETTTGVHRLYEMQRSGTLLFPAINVNDSVTKSKFDNKYGCRHSLIDGINRAT 252 Query 173 DVMLGGKLAVVCGYGDVGKGCAAALRGQGCRVIISEIDPICALQAAMEGFGVLPLDAVVG 232 DV++GGK+AVV GYGDVGKGCA +LRGQG RVI++EIDPICALQAAM+G+ V LD VV Sbjct 253 DVLIGGKVAVVAGYGDVGKGCAESLRGQGARVIVTEIDPICALQAAMDGYQVTTLDEVVE 312 Query 233 VADLFV 238 AD+F+ Sbjct 313 TADIFI 318 Lambda K H 0.320 0.134 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 69258123258 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40