bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3924_orf3 Length=201 Score E Sequences producing significant alignments: (Bits) Value 5833.PFL1605w 103 2e-21 > 5833.PFL1605w Length=1413 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 58/210 (27%), Positives = 111/210 (52%), Gaps = 32/210 (15%) Query 2 MFGLDLKDPGRYFALWDFLKKESSLSNSSNSNSSSSSSRRERCLTESPSLLRLSLEVSLL 61 M +KD G+ L+D++ ++N+ N + +L L L ++ Sbjct 1224 MLYYKMKDYGKVLCLYDYM-----INNTQNKPNEK--------------ILNLILNSAIQ 1264 Query 62 SQSRERTIEVLREMYIHRVYPTPQLASQLAAAARQVTEVHLLLRNLLLLQQHEEYSKQQR 121 ++S + T+ +LR+M+ +++YP+P++ +L R +TE+ LL+ +++ Q + Y + Sbjct 1265 TKSSKNTLFILRQMFTYKIYPSPKMVKKLYHVGRYITEIQLLINSMIRQQTKDIYEVNLK 1324 Query 122 RQQLLQTRIDEHELEVYRQGRPSVRSNETEQQQIRRRFFEKMDR-----------KPKPW 170 QL++ IDE+EL ++++G+ ++T + R +FF++ R K W Sbjct 1325 ENQLIRLNIDEYELNLFKEGK--TFKSKTPLDEAREQFFKRKQRMEKEKRMSKNKKSSDW 1382 Query 171 LPLSEFIKKKQKGGEEYAKRHDRPSPNTLD 200 LP ++++ K+KGGE YAKR DRP P D Sbjct 1383 LPYGQYLQSKKKGGEIYAKRVDRPRPLAFD 1412 Lambda K H 0.316 0.130 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 48387021971 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40