bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_3949_orf1
Length=276
Score E
Sequences producing significant alignments: (Bits) Value
31033.SINFRUP00000152138 65.1 2e-09
> 31033.SINFRUP00000152138
Length=1746
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query 175 VVVHVYILTARNLQNVDTIGMSDPYLKLQVGQQIT-VSDRVFDGNCNPNFYEHFVFQLLI 233
V+ VYI+ A NL D G +DPYL L+VGQQI DR NP F E F F +
Sbjct 1247 VLARVYIIKATNLAPSDPNGKADPYLVLRVGQQILDTKDRYIPKQLNPTFGEVFEFTVSF 1306
Query 234 PGPALLXIVVMDKGDVLQSDSPLGMVSVDLEERWLA 269
P L I VMD D++ +D +G +DLE R+ +
Sbjct 1307 PLDTELVIRVMDH-DLVGTDDIIGETRIDLENRFYS 1341
Lambda K H
0.317 0.133 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 90384126750
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40