bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_4068_orf3 Length=194 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL13P1.169 166 3e-40 > 5833.MAL13P1.169 Length=281 Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 82/200 (41%), Positives = 129/200 (64%), Gaps = 8/200 (4%) Query 1 IRKTINTLNCKVDTLEKAAAAAGVSG-QSKQHYITVTEVLKTRLLDVTKEFKDILMLRTE 59 +++TI + ++D L + + +S QSK H + LK RL D TK+FKD+L +R+E Sbjct 81 VKQTITDVTNELDLLVQYSCNLNISNPQSKTHIDNIISSLKNRLFDFTKKFKDVLQIRSE 140 Query 60 NLKRQDKRRNLYSFGGDSGTAEAEEM-------YDIEGGQRTTLVSRPATAYSQARAEAV 112 ++K+Q RR +YS+ + T + DIE GQ+ L +Y +RA+A+ Sbjct 141 HIKKQVNRRKMYSYTSNEATFNNDNYKFTPLGDIDIESGQQQVLKQPSKHSYLHSRADAM 200 Query 113 ENVQRVIGELASIFQRVATMIAHQEEMIQRIGQDIDTSMYHIREGQNELLNFYNRISSNR 172 EN+Q+VIG+LA +FQ+VATM+ Q+EMI+RI +DID S+ + REGQN LL ++NR++S R Sbjct 201 ENIQKVIGDLAQMFQKVATMVTQQDEMIKRIDEDIDISLTNTREGQNYLLTYFNRLTSTR 260 Query 173 SLIIKVFLLLMAFILFFVFF 192 +LI+++F + I+FFV F Sbjct 261 TLILQIFACIFILIVFFVIF 280 Lambda K H 0.321 0.134 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 44893337425 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40