bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_4086_orf3 Length=178 Score E Sequences producing significant alignments: (Bits) Value 28985.KLLA0E20537g 67.0 2e-10 > 28985.KLLA0E20537g Length=82 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 18/89 (20%) Query 83 AAYEEVQLRELEFDALESLFVYPCPCGDLFELPLADLQAAAAAAAAAAAAAAESGYSGFA 142 + Y+EV++ ++ FD +F YPCPCGD F++ + D+ Y G Sbjct 2 STYDEVEIEDMTFDPDTQIFTYPCPCGDRFQISIDDM------------------YDGED 43 Query 143 LASCPSCSLNLKVLFDQQQLQELQQELGL 171 +A CPSCSL ++V+FD++ L E E L Sbjct 44 IAVCPSCSLMIQVVFDKEDLVEYYVEANL 72 Lambda K H 0.310 0.122 0.343 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 35812709058 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40