bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_4092_orf1 Length=248 Score E Sequences producing significant alignments: (Bits) Value 5833.PFD0525w 107 5e-22 > 5833.PFD0525w Length=326 Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 64/245 (26%), Positives = 124/245 (50%), Gaps = 39/245 (15%) Query 4 VVQRLIEDYPELSRDLAKLNALEPLLRLLSMDRATLAASGSSATAAQQQQQQQQQQQQPQ 63 +V+RL+++YPE++R+L K+ A++PLL+LL Sbjct 74 IVERLVDEYPEVARNLDKIKAIDPLLKLLDNSNNH------------------------- 108 Query 64 VLEESEAAKAFIILEKTLEILASVMQNNPQIQQAVAELGGLGVLFALVKESPRSKALRVR 123 ILE L+IL+ + NNP++Q +V + L L ++ES ++ + + Sbjct 109 ------------ILESVLQILSLALSNNPELQDSVFKKNALKTLLIKLQESQKT-IIDKK 155 Query 124 ALQTLSCLLRNHRPSEETFLKSKGLTLLVYAIKSDDPKYQEKACSLCRHLVAEGLISFEQ 183 + +S L+R+H E F+ G+ LVY ++++ KYQEK+ L +HL+ + I+F+ Sbjct 156 LITAISALIRHHDQGENKFIDYGGVGFLVYGMQTNIFKYQEKSALLLKHLIHQNKITFDI 215 Query 184 IKETGLLQALEMLLPTLQ-DLSNVQFAETALQLVIXVLQQHRIFLSRTADLASLTATLTT 242 + +++ L L+ D + +Q+ ET +L + ++Q HR L+++ L ++ + Sbjct 216 FIKNDIMKGLVALVNNKNIDETGIQYGETTAELFLALIQNHRHKLAKSGYLHTIKKLIED 275 Query 243 RSEWL 247 R +L Sbjct 276 RLSYL 280 Lambda K H 0.317 0.129 0.339 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 74420426883 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40