bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_4186_orf2 Length=158 Score E Sequences producing significant alignments: (Bits) Value 5691.Tb11.01.2770 90.1 2e-17 > 5691.Tb11.01.2770 Length=173 Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 48/133 (36%), Positives = 80/133 (60%), Gaps = 4/133 (3%) Query 24 LNSTERILGWLTCFLGGLILSAVSMGAFNDMLLGKNNKFAVTYTIGNIIGLAGTSFLVGP 83 L+ ER+ G++ F+ +LS +S A L K+A T+ NI+ + GT FL GP Sbjct 45 LSFKERVSGYIIAFIVSFLLSTMSWIALPHSL----RKYAALNTMANIVSVGGTMFLCGP 100 Query 84 IQQFRNMADKSRLVTSCIFVGSLVATLLSSVYLKVGLVIVFFVCIQWLAYMWYSLSYIPY 143 Q + M D++R + +++ SL+ TL+S++ LK L+ V + Q+LA +WY+LSY+P+ Sbjct 101 SAQLKRMFDETRRGATTVYLTSLLMTLISALILKFVLLTVLLMLAQYLAMIWYTLSYVPF 160 Query 144 GQRAVLWIFRRLS 156 G+ AVL + R + Sbjct 161 GRSAVLKVLSRFT 173 Lambda K H 0.328 0.143 0.465 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 25621323489 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40