bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_4192_orf1
Length=267
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd6_560 113 5e-24
> 5807.cgd6_560
Length=1003
Score = 113 bits (283), Expect = 5e-24, Method: Composition-based stats.
Identities = 83/245 (33%), Positives = 125/245 (51%), Gaps = 16/245 (6%)
Query 29 LRTAMELPALCAVFGEAYPDPVRVVTIGPDTKELQKIQETQGADKVSSSVELCGGTHLSN 88
L A ++P + A+FGE YPDPVRV+++ L Q T D+ S+E CGGTH+ N
Sbjct 707 LSIAKQIPNIRAIFGETYPDPVRVLSVSKSVDSLINSQ-TDNNDQEKVSIEFCGGTHVEN 765
Query 89 AAQLEDFVVISEESIAKGVRRIVAVA---GEAAISARSELRDVCLSLSNLESASPAFPFF 145
+++ F +ISEE IAKG+RRIVAV E AI L+ L L
Sbjct 766 TSEIISFSIISEEGIAKGIRRIVAVTDNQSEIAIENAKRLKQEFKKLEELNGKE-----L 820
Query 146 EKEVQQAKAFVESNKMIPLLSRRRLLADLENKQKLGLELGKFRAKELLRVGK----LSGQ 201
E + K+ ++ K++PLL RR+L +E K + K + KE L + K GQ
Sbjct 821 ETLLNSFKSKLDETKLLPLLYRRQLSQIIEENYKRVIADAKKKQKERLNMAKELATKIGQ 880
Query 202 EAAAAAAAEGK-KFIVLNLEQLQGDGKALDEAAKALQSAAPSLPFLLLTXLE--SRGSSC 258
E + ++ + ++LN++Q+QGD K++D + + P P +L T E G S
Sbjct 881 EYSQQLSSNNEFPALILNIKQIQGDSKSMDVIGQDISKKYPEAPIMLFTSGEFNDNGVSV 940
Query 259 IXLSP 263
I + P
Sbjct 941 ISIMP 945
Lambda K H
0.317 0.132 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 84961079145
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40