bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_4223_orf1 Length=287 Score E Sequences producing significant alignments: (Bits) Value 44689.DDBDRAFT_0191793 63.5 7e-09 > 44689.DDBDRAFT_0191793 Length=512 Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 25/162 (15%) Query 62 GEDRGFGFVALRDLPAGFVVYAEAPLLFLQHSFNKCLVKACCCCGAPLGDPLSQLLHFFS 121 E +G G A + G ++++E PL +QH +N+ C C LG Q+LH+ Sbjct 17 NETKGRGLFAEKSFEKGELIFSERPLFSVQHVYNRATAWTCGNCFKFLGSLNKQMLHY-- 74 Query 122 AVPDSLHHLQASNINRDSLLQLQEQHECQQ----RNVQKEMIPCPGGCGEAFCSAKCLQS 177 + ++E E + N ++ C CGE +CS +C Sbjct 75 ----------------RKVFGIKEASELPEFENLFNFHTKVYSCFAKCGEKYCSEECRNV 118 Query 178 DFI-HHQ-LCVGRMN-EGDALVAFKRFAVEHCENLLLVAAAI 216 F HHQ LCVG + + + FK+ ++E E LL A AI Sbjct 119 AFYSHHQILCVGEQTPDSNPMYQFKKHSIETNELFLLAAQAI 160 Lambda K H 0.322 0.135 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 96012411040 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40