bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_4450_orf1 Length=158 Score E Sequences producing significant alignments: (Bits) Value 5207.CNF03140 70.5 1e-11 > 5207.CNF03140 Length=1484 Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/162 (30%), Positives = 74/162 (45%), Gaps = 10/162 (6%) Query 2 GPINFWRMFRGPDFARGPPPLVNFKRKGAPFQGKNPHTRGGPPPKEGLIDYPPLKIPETK 61 G NF+R F D++ PL++ +K PF + P K+ L+ + Sbjct 779 GFCNFYRRF-IKDYSSIAKPLIDLTKKDLPFVWEEPQRTSFEALKKSFTSVDLLRHYDPT 837 Query 62 KPFELNTEASGYEIGGA----PKKAGQPKGFPSRAMTPPQKKNPIYDRELLALGSAPKKG 117 K L T+AS Y I G K +P F S M P + PI+D+E+LA+ SA K+ Sbjct 838 KQLILETDASDYAIAGILSHEIDKKLEPVAFFSHKMLPAELNYPIHDKEMLAIVSAFKEW 897 Query 118 AHLWEPTKG--RGNTDHQALKNLKELKGSKPLRGRTARGVNF 157 H +E + R TDH ++L+ +K L R AR F Sbjct 898 RHYFEGARETIRVYTDH---RSLEYFMTTKQLNRRQARWSEF 936 Lambda K H 0.315 0.140 0.444 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 25621323489 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40