bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_4595_orf2 Length=75 Score E Sequences producing significant alignments: (Bits) Value 9598.ENSPTRP00000047853 116 2e-25 > 9598.ENSPTRP00000047853 Length=274 Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 54/75 (72%), Positives = 59/75 (78%), Gaps = 0/75 (0%) Query 1 PNSKGQNSFKNREKTPKPPKGPSFVEAFKAKMQPSLEKGGSLPKVEPKFFNFVKNFFRMP 60 P SKGQ SFK +EKTPK PKGPS VE KAKMQ S+EKGGSLPKVE KF N+VKN FRM Sbjct 200 PRSKGQESFKKQEKTPKTPKGPSSVEDIKAKMQASIEKGGSLPKVEAKFINYVKNCFRMT 259 Query 61 AREAFQNFWQWRKFL 75 +EA Q+ WQWRK L Sbjct 260 DQEAIQDLWQWRKSL 274 Lambda K H 0.319 0.135 0.432 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22364710172 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40