bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_4617_orf2 Length=137 Score E Sequences producing significant alignments: (Bits) Value 184922.16996 63.9 1e-09 > 184922.16996 Length=413 Score = 63.9 bits (154), Expect = 1e-09, Method: Composition-based stats. Identities = 36/106 (33%), Positives = 61/106 (57%), Gaps = 2/106 (1%) Query 2 KKEKNFLKKNGYGEVPFYLKEIKSQIEAEYDFVRSLRHSSHAGKPQTRLMEEP-ERQQLL 60 K + ++ +K GYG+ P YL +IK Q+ AE + ++ + G + M +P E++QLL Sbjct 296 KADMDWTEKEGYGQTPKYLAKIKKQVAAEQETIQKIEERYKGGVQKMAYMLDPVEKEQLL 355 Query 61 ASLRNKWQQINNEYQNLTFKSQIDTIGQERRKDFCEQQLLKIESFI 106 A ++ W+ +N EY K +T GQ+ RK + EQ+L +E+ I Sbjct 356 AGIKANWKLLNEEYTT-QLKVVQETFGQQNRKMWLEQRLADLENDI 400 Lambda K H 0.314 0.131 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22428990562 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40