bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_4672_orf1 Length=119 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL3P4.14 92.0 5e-18 > 5833.MAL3P4.14 Length=432 Score = 92.0 bits (227), Expect = 5e-18, Method: Composition-based stats. Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 0/61 (0%) Query 24 DYVVEELDARGNANNCAAGFMAMDVPAPRGPLFVLGNSFIRKYYSIFDRDHMMVGFMRAN 83 DY++EE D N C G M +DVP PRGP+F+ GNSFIRKYY+IFD DH ++G + AN Sbjct 370 DYIIEEGDTENNTLECVIGIMPLDVPPPRGPIFIFGNSFIRKYYTIFDNDHKLIGLIEAN 429 Query 84 H 84 H Sbjct 430 H 430 Lambda K H 0.321 0.135 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22381075488 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40