bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_4741_orf2 Length=149 Score E Sequences producing significant alignments: (Bits) Value 184922.112080 77.8 1e-13 > 184922.112080 Length=496 Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 54/75 (72%), Positives = 60/75 (80%), Gaps = 0/75 (0%) Query 73 SLDADLLVVLLQRGQVLAGLGKLPLLHALAHVPVHEGALGVHQVELVVHSGEDLRDGGAV 132 L ADLLVVLL+ G+VLAGLG+L LLHAL VPVHEGALGVHQ+ELVVH+G DL DG V Sbjct 41 GLGADLLVVLLEGGEVLAGLGELALLHALTDVPVHEGALGVHQIELVVHAGPDLGDGRRV 100 Query 133 ADHADGPHDLREVAA 147 DH G DLR+VAA Sbjct 101 GDHEAGALDLRKVAA 115 Lambda K H 0.318 0.136 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22854363588 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40