bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_4916_orf1 Length=145 Score E Sequences producing significant alignments: (Bits) Value 5833.PFE0835w 127 7e-29 > 5833.PFE0835w Length=1332 Score = 127 bits (320), Expect = 7e-29, Method: Composition-based stats. Identities = 56/124 (45%), Positives = 84/124 (67%), Gaps = 0/124 (0%) Query 1 LKRFHNVNRWSRSKTNTRVCFPYKTGEYLDMKKFILPGGLEQLREEDPSFNPQYELIAVN 60 LKRF+N NRW R+K ++ V +P+K EYL+M +IL GL+ + + +P + P YELI VN Sbjct 1192 LKRFNNTNRWLRTKIDSYVYYPHKDKEYLNMAPYILQDGLKHMTKLNPKYAPLYELIGVN 1251 Query 61 VHSGELGGGHYYAYTKIRGQWYEFNDSCVTAVHEDKCHSADAYMLTYELRSSREDSMRRI 120 H+G L GGHY+AY K+ QWY FNDSCV+ + E + ++ +AY+L Y+L S + + Sbjct 1252 CHTGSLCGGHYFAYVKLNDQWYNFNDSCVSTIDEAEVNTKNAYLLFYQLISHKNEKFSGY 1311 Query 121 AKVK 124 A+ + Sbjct 1312 AQTR 1315 Lambda K H 0.317 0.132 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22480264135 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40