bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_4933_orf2
Length=179
Score E
Sequences producing significant alignments: (Bits) Value
3702.AT5G41770.1 213 2e-54
> 3702.AT5G41770.1
Length=705
Score = 213 bits (542), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 136/176 (77%), Gaps = 0/176 (0%)
Query 1 YIYIWISYALFEELQAKDMDRCRSVYEKALEVVPHKLFSFAKLWTLFVAFEIRQLNLERA 60
YIY+WI+YALFEE++ +D++R R VY + L+++PH FSFAK+W L FEIRQLNL A
Sbjct 383 YIYLWINYALFEEIETEDIERTRDVYRECLKLIPHSKFSFAKIWLLAAQFEIRQLNLTGA 442
Query 61 RKIFGAAIGKCGKEKIFQAYAQLELRLGNIDRCRQIHAKFIETYPLNPKAWIQMIELEVL 120
R+I G AIGK K+KIF+ Y ++EL+LGN+DRCR+++ +++E P N AW + ELE
Sbjct 443 RQILGNAIGKAPKDKIFKKYIEIELQLGNMDRCRKLYERYLEWSPENCYAWSKYAELERS 502
Query 121 AEETERARAICEIAVSMEQMEMPELIWKAYIDMEVNWGALDRARALYERLLDKTQH 176
ETERARAI E+A+S ++MPEL+WKAYID E++ G L+R RALYERLLD+T+H
Sbjct 503 LVETERARAIFELAISQPALDMPELLWKAYIDFEISEGELERTRALYERLLDRTKH 558
Lambda K H
0.326 0.137 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 36430169559
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40