bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_4999_orf1 Length=138 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0373 206 1e-52 > 5833.PF14_0373 Length=355 Score = 206 bits (525), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 92/133 (69%), Positives = 110/133 (82%), Gaps = 0/133 (0%) Query 1 TSVWANPDEPAVVSVGRFAPDNFRAAGYAENAPNPTSINSDAHPDFRDYRLGSGSPDRRP 60 T VW NP EPA+VS+G+F P NFR AGYAEN PNP SINSD HPDFR+YRL SG+ DRR Sbjct 133 TDVWHNPKEPAIVSIGKFEPRNFRPAGYAENCPNPESINSDHHPDFREYRLRSGNEDRRS 192 Query 61 FMYFLSASYFFIGASMMRSLLCKMVHFWWVSKDLMAAGTTEIDLRPIEVGTTAVFKWRGK 120 FMYF+SASYFFI +S+MRS +CK VHF+W+SKDL+A GTTE+D+R + G V KWRGK Sbjct 193 FMYFISASYFFIMSSIMRSAICKSVHFFWISKDLVAGGTTELDMRTVNPGEHVVIKWRGK 252 Query 121 PVFVRHRTPEEIE 133 PVFV+HRTPE+I+ Sbjct 253 PVFVKHRTPEDIQ 265 Lambda K H 0.322 0.137 0.447 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22344559178 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40