bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5045_orf1 Length=86 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL13P1.279 79.0 3e-14 > 5833.MAL13P1.279 Length=288 Score = 79.0 bits (193), Expect = 3e-14, Method: Composition-based stats. Identities = 35/79 (44%), Positives = 55/79 (69%), Gaps = 2/79 (2%) Query 1 DQLHRIFKLLGTPSPTE--GLAGLPQWRNNFKYYPPMKWKYIVPGLSEAGLDLLSQMLTF 58 DQL RIF++LGTP+ + LP++ NF Y P+ W+ + GL E+G+DLLS+ML Sbjct 208 DQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKL 267 Query 59 EASRRISAKTAMQHSYFDD 77 + ++RI+AK A++H+YF + Sbjct 268 DPNQRITAKQALEHAYFKE 286 Lambda K H 0.319 0.136 0.422 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22443299781 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40