bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5061_orf1 Length=156 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd8_3000 80.1 2e-14 > 5807.cgd8_3000 Length=681 Score = 80.1 bits (196), Expect = 2e-14, Method: Composition-based stats. Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 7/155 (4%) Query 1 FRLGFAWSFIWLSTASAMAVMERYGVNYCFLLDLAPRGQTSSVSFFCTAALHFVLTTATC 60 FRL F+ + ++ +ME YGVNY +++ + P + ++ + F AAL ++ Sbjct 308 FRLVLMGIFVLWGSGISICIMEYYGVNYKYMIGMDPNSRVAATTIFSFAALQTIVWIIIF 367 Query 61 ALYLADSKL--HLLGDGQMYHF----YPLGLLLLQLLLLLFPSRALTYKARRQVLGAFFT 114 L++ D +L L + ++ YP L+ ++ LL PS+ TY+ R+ + + Sbjct 368 TLFITDYRLGISLFSYFNIEYYPLWVYPALLMAIEFSLLFIPSKTFTYEYRKAIFYSILE 427 Query 115 VLKAGAF-TVRDVKLVANIIGDVLTSLAKPLGDLQ 148 V G V +V L ANI+GD+ T+L+KP GD++ Sbjct 428 VFSHGIIPKVVNVTLRANIVGDIFTTLSKPFGDVE 462 Lambda K H 0.331 0.143 0.439 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 24371502831 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40