bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5087_orf1 Length=128 Score E Sequences producing significant alignments: (Bits) Value 69293.ENSGACP00000015711 172 3e-42 > 69293.ENSGACP00000015711 Length=309 Score = 172 bits (435), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 76/126 (60%), Positives = 99/126 (78%), Gaps = 1/126 (0%) Query 3 PCHTSGHVLYYVESRTDSNATPIIFTGDTLFLAGCGRFFEGDATQMHRALMKIIGELPAE 62 PCHT+GH+ YYV ++ S P +FTGDTLF+AGCG+FFEG A QMH+AL+ I+G LP E Sbjct 157 PCHTTGHICYYV-TKDKSTEPPAVFTGDTLFVAGCGKFFEGTAEQMHKALIDILGGLPPE 215 Query 63 TLVYCGHEYTVANLQFAASVEPNNPAVQNKLEWAQQQRNAGKPTIPSSIGEEKTYNPFMR 122 T VYCGHEYTV+NL+FA VEP+N +Q KL WA+++ + G+PTIPS++ EE T+NPFMR Sbjct 216 TRVYCGHEYTVSNLKFARHVEPDNEDIQKKLAWAKEKCSNGEPTIPSTLAEEFTFNPFMR 275 Query 123 VDKPEV 128 V + V Sbjct 276 VKEKSV 281 Lambda K H 0.317 0.133 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22424899233 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40