bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_5219_orf2
Length=158
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF13_0044 124 9e-28
> 5833.PF13_0044
Length=2375
Score = 124 bits (311), Expect = 9e-28, Method: Composition-based stats.
Identities = 65/135 (48%), Positives = 83/135 (61%), Gaps = 9/135 (6%)
Query 1 EALARGYSVERLHELTHIDPWFLSKLEHIQQLKESLSKVSPAQLTSADLFYVKKYGFSDR 60
+A ++++HELTHID WFL K +I L+ L + QL+ DL Y KK+GFSD+
Sbjct 1105 QAFHLNMPMDKIHELTHIDYWFLHKFYNIYNLQNKLKTLKLEQLSFNDLKYFKKHGFSDK 1164
Query 61 QIASYVGGGP---------VEGLRVTEEDVWRYRKALVVEPYIKRIDTLAAEFPAQTNYL 111
QIA Y+ + RVTE DV +YR+ L + P+IK IDTL+AEFPA TNYL
Sbjct 1165 QIAHYLSFNTSDNNNNNNNISSCRVTENDVMKYREKLGLFPHIKVIDTLSAEFPALTNYL 1224
Query 112 YLTYHGVVDDVEPLN 126
YLTY G DV PLN
Sbjct 1225 YLTYQGQEHDVLPLN 1239
Lambda K H
0.316 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 25621323489
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40