bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5268_orf2 Length=181 Score E Sequences producing significant alignments: (Bits) Value 5833.PFL1855w 229 3e-59 > 5833.PFL1855w Length=967 Score = 229 bits (584), Expect = 3e-59, Method: Composition-based stats. Identities = 101/181 (55%), Positives = 135/181 (74%), Gaps = 0/181 (0%) Query 1 PFKLARLQQQTSDSKSHAYQRQMWEALRKSINGLVNKANVSNLTQLVQELFRENLVRGRG 60 PFKL RL+ + ++ KS YQ+Q W L+K IN +VNK N+ N++++ ELF NL+RG+G Sbjct 410 PFKLERLKTEVTNKKSVLYQKQEWMKLKKKINNIVNKVNIDNISEVCYELFECNLIRGKG 469 Query 61 LFCRALIRSQLASPGFTGVYASLLCIVNSKLPDIGELVLKRLILQFRRAYRRNDKVVCLA 120 LF RALI +QL+SP FT V+ LLCIVNSK P+IG L ++R+IL FRRAY+RNDK++C Sbjct 470 LFSRALIHAQLSSPAFTNVFTCLLCIVNSKFPNIGLLTIQRIILHFRRAYKRNDKILCFN 529 Query 121 CVEFFAHLVNQRIAHELLALQLCELLLQQPTNDSVEVCIGFLKAVGQVLEDVCRGGFDAA 180 V+F AH++NQRI HE++ LQLC LLLQ TNDSV+VC FL VG++ ++CR G D Sbjct 530 TVKFIAHMINQRIVHEIVGLQLCSLLLQNITNDSVQVCTYFLAEVGELYTNICRKGLDII 589 Query 181 F 181 F Sbjct 590 F 590 Lambda K H 0.327 0.139 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 37665090561 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40