bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5505_orf2 Length=184 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL7P1.162 310 1e-83 > 5833.MAL7P1.162 Length=4971 Score = 310 bits (795), Expect = 1e-83, Method: Composition-based stats. Identities = 145/184 (78%), Positives = 160/184 (86%), Gaps = 0/184 (0%) Query 1 LTLTQALKMKLGGNPFGPAGTGKTESVKALGSALGRYTLVFNCDKTFDFNAMGRLFSGLC 60 LTLTQALKMKLGGNPFGPAGTGKTESVKALG+ LGRY LVFNCD++FDF AMGR+F GLC Sbjct 1980 LTLTQALKMKLGGNPFGPAGTGKTESVKALGAQLGRYVLVFNCDESFDFTAMGRIFVGLC 2039 Query 61 QVGAWGCFDEFNRLDERILSAVSEQILTIQVGLREGKKEIELLGRATKLNTNVGIFVTMN 120 QVGAWGCFDEFNRL+ERILSAVSEQILTIQ L + K EIE+L + LN NVGIFVTMN Sbjct 2040 QVGAWGCFDEFNRLEERILSAVSEQILTIQTSLVQRKNEIEILNKKIGLNKNVGIFVTMN 2099 Query 121 PGYAGRSNLPDNLKQLFREVAMIKPDKQLIAQVTLYAQGFRSAERLSSKIISLYDLCDRQ 180 PGYAGRSNLPDNLKQLFR AMI+P+KQLI +VTL++QGF SAE LSSKI+SL+DLC Q Sbjct 2100 PGYAGRSNLPDNLKQLFRSFAMIEPNKQLIVEVTLFSQGFISAEHLSSKIVSLFDLCSEQ 2159 Query 181 QCNQ 184 Q Sbjct 2160 LSKQ 2163 Lambda K H 0.321 0.138 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 39517472064 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40