bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5585_orf1 Length=164 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd7_3430 185 4e-46 > 5807.cgd7_3430 Length=637 Score = 185 bits (470), Expect = 4e-46, Method: Composition-based stats. Identities = 79/168 (47%), Positives = 117/168 (69%), Gaps = 6/168 (3%) Query 2 RQLIEAVHFLHTEKRLVHRDLKTANLVVDRDYNIRLCDFGKTRSLEQHGKLK-----LED 56 RQL +AV+F+H +VHRD+KTAN+++DR N++LCDFG+TR++ K L++ Sbjct 418 RQLCDAVNFIH-HNNMVHRDIKTANIILDRSNNVKLCDFGQTRTMNIATKTSPPGVVLDE 476 Query 57 NGGSPRYMAPECFVEGNYVDEKLDIWGLACCLIEILGGPIPYEDIHSNEGVIHALLYNRR 116 NGGSPRYMAPECF G +DEK DIW +ACCL+EI GGPIP+ + SNE VI+A++ ++ Sbjct 477 NGGSPRYMAPECFYIGRSIDEKSDIWAIACCLLEIFGGPIPFYEYSSNEEVINAIIVEKK 536 Query 117 KPTVPAWFHPSVRATLDNCFTWNPWERPDTQHLKNVFDKLTPSELNKY 164 KP +P+WFHPS+ L CF P++RP + + + + + ++ +Y Sbjct 537 KPKIPSWFHPSISNLLSKCFERKPFKRPSSYEVLMILNGINSEDIKEY 584 Lambda K H 0.322 0.141 0.463 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 28631644438 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40