bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5804_orf2 Length=76 Score E Sequences producing significant alignments: (Bits) Value 44689.DDB_0191457 79.3 3e-14 > 44689.DDB_0191457 Length=369 Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 45/74 (60%), Positives = 56/74 (75%), Gaps = 0/74 (0%) Query 2 EDVAAIRSPFAATMMEGLPVVKQKKLEDYFPDAPPMALDLLRQLLQFNPLKRISAEKALE 61 ED+ AI+SPFA TM+E LP + L D +P A ALDLL++LLQFNP KRI+AE+AL Sbjct 241 EDIEAIKSPFAGTMLESLPPSNPRSLSDMYPSASVDALDLLKKLLQFNPDKRITAEEALA 300 Query 62 HPYVRQFHNPEDEP 75 HP+V QFHNP +EP Sbjct 301 HPFVTQFHNPAEEP 314 Lambda K H 0.319 0.137 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23163449821 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40