bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5838_orf1 Length=140 Score E Sequences producing significant alignments: (Bits) Value 7165.AGAP010011-PA 79.0 4e-14 > 7165.AGAP010011-PA Length=295 Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 8/131 (6%) Query 6 YAETLVPFFMDPDTLFVISTDWSHWGPRSSYTYLPENVDKSLPLYKKIQALDREAIDCVV 65 Y + P+ DP LFVIS+D+ HWG R YTY E S P+YK I+ LD+ +D + Sbjct 167 YGKIFAPYLADPQNLFVISSDFCHWGQRFRYTYYEEG---SGPIYKWIETLDKMGMDLIE 223 Query 66 NLNGSCLEEHVAKTGNRICGYDALLLFLRLLERVAESSGQRSEDLFSASLLSYSQSSLIR 125 L E++ K N ICG + + ++ +E + +R S L Y QS+ Sbjct 224 TLKADSFSEYLRKYNNTICGRHPIGVLMQAVEEL-----KRRGHRMSFKFLKYDQSNQCC 278 Query 126 SASENAVGYVA 136 +++V Y + Sbjct 279 DKKDSSVSYAS 289 Lambda K H 0.319 0.135 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22914837435 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40