bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5850_orf1 Length=118 Score E Sequences producing significant alignments: (Bits) Value 3702.AT2G21390.1 97.8 7e-20 > 3702.AT2G21390.1 Length=1218 Score = 97.8 bits (242), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 44/116 (37%), Positives = 71/116 (61%), Gaps = 1/116 (0%) Query 1 WDPELGGFFYATLSHVKFCMTNGDKGIVCSLSESIYIVTVAQQQLLYMDRRAQLHCKPVA 60 WD + G F Y TL+H+K+C+ NGD GI+ +L IYI V+ + +DR + + Sbjct 537 WD-DNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAITIN 595 Query 61 CNDYLFKVAPSRRDYMKVALLVRYGGLCGNSLIGYLKEKGYSEVALEFLSDRKSKF 116 +Y+FK+A R+ Y V +++ LCG ++I YL++KG+ EVAL F+ D + +F Sbjct 596 ATEYIFKLALLRKKYDHVMSMIKNSQLCGQAMIAYLQQKGFPEVALHFVEDERIRF 651 Lambda K H 0.326 0.140 0.434 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22460540320 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40