bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_6059_orf1
Length=110
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd8_3280 103 2e-21
> 5807.cgd8_3280
Length=828
Score = 103 bits (256), Expect = 2e-21, Method: Composition-based stats.
Identities = 55/123 (44%), Positives = 73/123 (59%), Gaps = 13/123 (10%)
Query 1 AFFMRSVLFDYYKHVSTCSNTMLTRLCGLHAIRLKDKSGQIMG---------GKEPWRR- 50
A F RS+L Y+ H+ + N+++TR+ GLHA+R K Q G R+
Sbjct 587 AVFFRSILSKYFNHIKSNQNSLITRIYGLHALRFKKPLLQPFNTIREQISSNGNSILRKS 646
Query 51 ---KTYFMVMENFFHTPVEIHRRYDLKGSTQGRSLPPELRSDPTVARKDNDMARDGEMIE 107
K +F+VMEN FHTPVEIHRRYD+KGS GRS P L+ D T+A K+ DM + EM+
Sbjct 647 KIHKIFFIVMENIFHTPVEIHRRYDIKGSWIGRSTPLILQEDKTIALKELDMKNNKEMLH 706
Query 108 IGQ 110
I Q
Sbjct 707 INQ 709
Lambda K H
0.324 0.138 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 23096258976
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40