bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_6194_orf1 Length=114 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd5_900 131 6e-30 > 5807.cgd5_900 Length=611 Score = 131 bits (330), Expect = 6e-30, Method: Composition-based stats. Identities = 56/102 (54%), Positives = 75/102 (73%), Gaps = 1/102 (0%) Query 12 LRGPFVSSVVQQMLTGTHWGILDYLVVDLPPGTGDIHITLTQQQAPLDGCVVVTTPQALS 71 LRGP S+V Q++TGT W LDYLV+D PPGTGDI +++ Q A +DG ++VTTPQ LS Sbjct 317 LRGPIAGSIVTQLITGTVWEDLDYLVLDFPPGTGDIQLSIAQSIA-IDGAIIVTTPQDLS 375 Query 72 LVDAEKGIRMLKSVCIPTLAVVCNMAYFVCDSCDKRHELFGR 113 + D E+GI + + IP L VV NM+YF+CD C+KRHE+F + Sbjct 376 IADVERGIHLFNKLNIPILTVVENMSYFICDGCEKRHEIFSK 417 Lambda K H 0.324 0.139 0.436 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22778399648 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40