bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_6423_orf1 Length=162 Score E Sequences producing significant alignments: (Bits) Value 5833.PF10_0165 206 2e-52 > 5833.PF10_0165 Length=1094 Score = 206 bits (524), Expect = 2e-52, Method: Composition-based stats. Identities = 92/159 (57%), Positives = 124/159 (77%), Gaps = 0/159 (0%) Query 2 GALVVWFDDESEMLKKWAEFVREVDPDFLTGYNCINFDLCYLLTRASALKAEGVASLSRL 61 G+ V+WF+DE +L+ W EF+ +DPDFLTGYN INFDL Y+L R +AL + + L R+ Sbjct 359 GSNVIWFNDEKTLLEAWNEFIIRIDPDFLTGYNIINFDLPYILNRGTALNLKKLKFLGRI 418 Query 62 KSIESRISDTRFSSRALGTHDNKEIPMEGRVQFDLLELIRRDHKLKSYSLNYVSSEFLKE 121 K++ S + D+ FSS+ GTH+ KEI + GR+QFD+ +LI+RD+KLKSY+LNYVS EFLKE Sbjct 419 KNVASTVKDSSFSSKQFGTHETKEINIFGRIQFDVYDLIKRDYKLKSYTLNYVSFEFLKE 478 Query 122 QKEDVHYSMIGDLFRGSPTTRRRIAVYCLKDALLPLRLL 160 QKEDVHYS++ DL SP +R+RIA YC+KD +LPLRL+ Sbjct 479 QKEDVHYSIMNDLQNESPESRKRIATYCIKDGVLPLRLI 517 Lambda K H 0.322 0.137 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 27386790332 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40