bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_6454_orf1 Length=190 Score E Sequences producing significant alignments: (Bits) Value 8090.ENSORLP00000015378 249 4e-65 > 8090.ENSORLP00000015378 Length=2135 Score = 249 bits (635), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 107/191 (56%), Positives = 154/191 (80%), Gaps = 2/191 (1%) Query 1 VVVAAEEAAWGLQMSSHLVVIVDTKRFTE--NGYEDYPIADVLQMLGRATRPGIDKHGYV 58 VVV++ WG+ +S+HLV+++DT+ + + Y DYPI DVLQM+G+A RP +D G Sbjct 1642 VVVSSRSLCWGISISAHLVIVMDTQYYNGKIHAYVDYPIYDVLQMVGKANRPMLDDEGRC 1701 Query 59 VLLCPSSKREFYKKFIFEPLPIESQLEQHLQDHVNAEVVLKTIESKQDAVDWLTWSFLYR 118 V++C SK++F+KKF++EPLP+ES L+ L DH NAE+V KTIE+KQDAVD+LTW+FLYR Sbjct 1702 VIMCQGSKKDFFKKFLYEPLPVESHLDHCLHDHFNAEIVTKTIENKQDAVDYLTWTFLYR 1761 Query 119 RLSKNPNYYGLQGTSHQHLSDFLSELVESAVHSLEQAQCLAEKNELELEPLNLGLISAFY 178 R+++NPNYY LQG SH+HLSD LSELVE+ +H LEQ++C++ ++E+++ PLNLG+I+A+Y Sbjct 1762 RMTQNPNYYNLQGMSHRHLSDHLSELVENTLHDLEQSKCISIEDEMDVAPLNLGMIAAYY 1821 Query 179 YVKVATIELFN 189 Y+ TIELF+ Sbjct 1822 YINYTTIELFS 1832 Lambda K H 0.319 0.135 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 42433428525 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40