bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_6462_orf2 Length=205 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0173 62.4 8e-09 > 5833.PF14_0173 Length=838 Score = 62.4 bits (150), Expect = 8e-09, Method: Composition-based stats. Identities = 44/139 (31%), Positives = 75/139 (53%), Gaps = 6/139 (4%) Query 33 QEIDALFDELCRPIKGRLVVGNLYRNA-RGVEPSGAEIHLRAVEIYGSALNAFLKIASID 91 + ++++F LC K L + +LY+N + E E++LR E+YGS++ AF I ++ Sbjct 283 ENLESVFKHLCNE-KNILTLIDLYKNIYKDEEIDKYELNLRLTEVYGSSILAFKNIVFLN 341 Query 92 GKD-LCTRENFTSLSANVGVDSDKAESIWDEYTKGVHSSDDRITLSTLIGLMSGELSPEE 150 +D LC NF + VG+ + +SIWDE +++ I L ++ +M+GEL EE Sbjct 342 VEDALCNYINFEIVCEKVGLSNANIKSIWDEINI---MNEEYIPLEIVLSIMNGELFIEE 398 Query 151 AAAKEAELRSWGNRIWAFF 169 A +S N++ FF Sbjct 399 AYIAYNLKKSLLNQVVNFF 417 Lambda K H 0.314 0.133 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 50836997767 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40