bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_6480_orf3 Length=166 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd1_350 97.4 1e-19 > 5807.cgd1_350 Length=569 Score = 97.4 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 5/136 (3%) Query 17 IRLRGLPWDVNEDAIIRFVKPVVEIRESDVCVCVGLNKRVTGEAYVNVHTTEMRDMAVRM 76 +RLRGLPW II F P+ I D+ + + ++TGEAYV + + + ++++ + Sbjct 318 VRLRGLPWKAAVLDIIAFFNPICRISSYDIAISYNKDGKMTGEAYVLLPSIKAYELSLTL 377 Query 77 LHGRMMGARWIEVFRSSAEDFERAQQ----RRVAMLSSDSRDGRDADVKVLNLTVLKLRG 132 LHG+ MG RWIEV SS ++F Q ++ S D + D + N +VL+LRG Sbjct 378 LHGKRMGKRWIEVLPSSTKEFLICLQITSLKKQNQNPSIFNDNKIID-RYYNRSVLRLRG 436 Query 133 LPWTCTEMNVVNFFKS 148 LPW+ TE+ +V FF S Sbjct 437 LPWSTTEIEIVQFFIS 452 Lambda K H 0.324 0.137 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 29876498544 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40