bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_6588_orf1
Length=116
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF11_0174 82.0 5e-15
> 5833.PF11_0174
Length=700
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Query 2 PNKNTENLEAPVADSRTYLSRHGG-VSTALELELSDETVPLNWVYDTKDNLHRNEWKMLA 60
PNKNT N+ + D + YL + + L + LSD+ V +Y+T+DN HR++WK+LA
Sbjct 61 PNKNTYNV--GITDYKKYLLENNYEFVSELNVILSDDYVLYGDIYNTQDNEHRSKWKVLA 118
Query 61 VKDKEKKVVGGWTAVYDEGFEVHLTNKTRLFAILKYSVKQNCPEAKDGDLEDSNGE 116
V D+ K+V+G WT + DEGFE+ + N+T A++ Y C D D DSNG+
Sbjct 119 VYDENKRVIGTWTTICDEGFEIKIGNETYA-ALMHYEPNGKCGPVSDEDSLDSNGD 173
Lambda K H
0.310 0.129 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22619469984
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40