bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_6681_orf1 Length=140 Score E Sequences producing significant alignments: (Bits) Value 10090.ENSMUSP00000016951 67.8 1e-10 > 10090.ENSMUSP00000016951 Length=382 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 2/74 (2%) Query 68 EKAMVDDPQLIETAISDMFRVDKADFSEMTGDRDLFVSSFVHQADIDVNEEGTEATAASA 127 E++ + + L + D+F KAD S M+G RDLFVS VH++ +DVNE+GTEA AA+ Sbjct 279 EESYILNSNLCCLGVQDLFSSGKADLSGMSGSRDLFVSKIVHKSFVDVNEQGTEAAAATG 338 Query 128 MIM--MLRAMPMPK 139 I+ + MP P+ Sbjct 339 GIIQVLCEKMPTPQ 352 Lambda K H 0.321 0.133 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22914837435 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40