bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_0003_orf1
Length=254
Score E
Sequences producing significant alignments: (Bits) Value
7295431 34.3 0.26
YDR412w 33.1 0.58
Hs20543401 31.6 1.6
Hs13236553 30.4 3.9
SPAC29A4.09 30.0 5.1
Hs4504797_1 29.3 8.8
> 7295431
Length=770
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query 26 KLEFVTGVSKRKEQRRNEAKIRAIERQKEERRRLRAERREKIREHITHVRHS 77
++EF++G KRK +RR+ AK K ER+R+R E +++ H++ S
Sbjct 550 RIEFLSGFRKRKNERRSRAKADLERNLKNERKRIRQE----VKDGFNHLKKS 597
> YDR412w
Length=235
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query 23 RSCKLEFVTGVSKRKEQRRNEAK--IRAIERQK--EERRRLRAERREKIREHITHVRHS 77
+ +L+++TG KRK QR+ +A+ I+ ER + EER+++R ER+E + E + + S
Sbjct 33 KDSRLDYLTGFHKRKLQRQKKAQEFIKEQERLRKIEERQKIRQERKEVMEEQLKTFKES 91
> Hs20543401
Length=2092
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Query 97 VSQTKGSSSSSKRHRNAAGSATSCYVSVGVENNAEAQLSQDHAVEPMQNVRLLPPSA--- 153
+S + S + S RH+ ++G +S E + A D EP + LPP
Sbjct 425 LSTSNSSDTESNRHKLSSGLLPKLAISTEGEQDEAASCPGDPHEEPGKPA--LPPEECAQ 482
Query 154 -EEAAASPWQIASCVSLSVGGFMEHLK 179
E +P S +LSVG F EHL
Sbjct 483 EEPEVTTPASTISSSTLSVGSFSEHLD 509
> Hs13236553
Length=213
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 0/36 (0%)
Query 28 EFVTGVSKRKEQRRNEAKIRAIERQKEERRRLRAER 63
E++TG KRK +R+ A +R KEE+R+LR ER
Sbjct 29 EYLTGFHKRKVERKKAAIEEIKQRLKEEQRKLREER 64
> SPAC29A4.09
Length=203
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 0/52 (0%)
Query 14 QTLEVSAAQRSCKLEFVTGVSKRKEQRRNEAKIRAIERQKEERRRLRAERRE 65
Q LE + + E++TG KRK +RR A+++ ++++EER LR RE
Sbjct 22 QRLEEIVFDKEKRKEYLTGFHKRKVERRKHAQVQLEQQKREERLALRKSLRE 73
> Hs4504797_1
Length=1221
Score = 29.3 bits (64), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 0/38 (0%)
Query 34 SKRKEQRRNEAKIRAIERQKEERRRLRAERREKIREHI 71
++R +Q+ E KI +E+QKEE +R ER ++ EH+
Sbjct 627 AERLKQKEQERKIIELEKQKEEAQRRAQERDKQWLEHV 664
Lambda K H
0.310 0.121 0.329
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 5258582968
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40