bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_0027_orf1 Length=120 Score E Sequences producing significant alignments: (Bits) Value At5g56900 51.2 4e-07 CE19798 42.4 2e-04 7303619 41.6 3e-04 SPAC1F3.09 40.8 6e-04 Hs22064004 32.3 0.24 CE09811 30.8 0.70 YGR093w 30.4 0.83 7296090 30.0 1.2 ECU06g1640 28.1 3.8 YOL036w 27.7 4.9 > At5g56900 Length=593 Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 12/108 (11%) Query 9 LFEKRAKRAGLSL--QKLPETADITSLSELANDPCLGYFYVEVPGVLTAKGQTIDRYLHV 66 +F A++ G L +K ++ D + + LG FYVE+P G + L Sbjct 486 IFSLAAEKLGFKLVTKKFNDSTDGRKYLQKEYNAALGLFYVELP-----DGTVLSHTLE- 539 Query 67 QPGRDSGKIPMTFGREVMAELLGLRDKVNWQACLVPKDEEAKLAAALR 114 ++ P FGREV+A LL + D+ +W+ C + ++EEAKLA + Sbjct 540 ----ENEVFPAQFGREVLAGLLKIPDRADWRNCKISQEEEAKLAEDFK 583 > CE19798 Length=533 Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 15/85 (17%) Query 32 SLSELANDPCLGYFYVEVPGVLTAKGQTIDRYLHVQPGRDSGKIPMTFGREVMAE--LLG 89 SL ++ N+ C YF E+P G + R P+ FGREV+A +L Sbjct 447 SLLDMVNEGC-PYFVAELP-----DGSKLFT-------RSMKGFPLHFGREVLASTPILD 493 Query 90 LRDKVNWQACLVPKDEEAKLAAALR 114 DKV+W+AC++ K++E +L L+ Sbjct 494 CEDKVDWKACVLAKEKEVELVNKLK 518 > 7303619 Length=537 Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 19/111 (17%) Query 10 FEKRAKRAGLSLQKLPETADITSLSELANDPCLGYFYVEVPGVLTAKGQTIDRYLHVQPG 69 FE +A+ L + LP L E+ YF E+P T + + + Sbjct 437 FEDKAEEFNLEFETLPALDSEKMLPEMG-----PYFLAELPDDSTLITRQMKHF------ 485 Query 70 RDSGKIPMTFGREVMA--ELLGLRDKVNWQACLVPKDEEAKLAAALRDVLG 118 P+ F R+V LL +KVNW+ CL+ KDEE R Sbjct 486 ------PIHFARDVFCSENLLNCDEKVNWKDCLLDKDEEVAYVEDFRKAFA 530 > SPAC1F3.09 Length=561 Score = 40.8 bits (94), Expect = 6e-04, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 14/75 (18%) Query 42 LGYFYVEVPG--VLTAKGQTIDRYLHVQPGRDSGKIPMTFGREVMAELLGLRDKVNWQAC 99 L YF V +P +L + Q +R+ + FGR A++LGL D+V+W+ C Sbjct 490 LNYFRVFLPSGKILIHRLQLRERF------------DLQFGRRAAAKILGLEDRVDWRKC 537 Query 100 LVPKDEEAKLAAALR 114 + +DEE + A + Sbjct 538 VQTEDEEKAESEAFK 552 > Hs22064004 Length=363 Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 0/36 (0%) Query 2 EALQSGELFEKRAKRAGLSLQKLPETADITSLSELA 37 EA+QSGE+ A+R+G S QK P+ +T ++A Sbjct 250 EAVQSGEMARSGAQRSGASTQKQPQCRALTPAGQVA 285 > CE09811 Length=1230 Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust. Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 3/41 (7%) Query 46 YVEVPGVLTAKGQTIDRYLHVQPGRDSGKIPMTFGREVMAE 86 YV++P V+ + ++RY + GR K PM + RE+ A+ Sbjct 296 YVKLPPVIVIQ---LNRYKYTSKGRQKLKTPMAYPREIPAK 333 > YGR093w Length=507 Score = 30.4 bits (67), Expect = 0.83, Method: Composition-based stats. Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%) Query 72 SGKIPMTFGREVMAELLGLRDKVNWQA--CLVPKDEE 106 S I + FGR V+A LL L +V W + CL K +E Sbjct 450 SETIDLQFGRRVLAFLLNLPRRVKWNSSTCLQTKQQE 486 > 7296090 Length=210 Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust. Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 0/32 (0%) Query 42 LGYFYVEVPGVLTAKGQTIDRYLHVQPGRDSG 73 L + V VPG+ KGQ I Y P +DSG Sbjct 106 LHWLVVNVPGLDIMKGQPISEYFGPLPPKDSG 137 > ECU06g1640 Length=395 Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust. Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 3/31 (9%) Query 74 KIPMTFGREVMAELLGLRDKVNWQACLVPKD 104 KIP+ F V +LL R + NW C P+D Sbjct 174 KIPLEF---VTTDLLDYRVEANWSLCNFPQD 201 > YOL036w Length=761 Score = 27.7 bits (60), Expect = 4.9, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query 51 GVLTAKGQTIDRYLHVQPGRDSGKIPMTFGREVMAELLGLRDKVNWQACLVPKDEEAKLA 110 GVL+ KG + + + P +G++ +T ++ E + RD ++ + L P D KLA Sbjct 115 GVLSDKGNSKEELALLPPLPHTGEMEITPQFDI-NEAIFERDDISHSSRLEPDDVLTKLA 173 Query 111 AALRDVLGAN 120 + RD G + Sbjct 174 NSTRDATGED 183 Lambda K H 0.317 0.135 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1160968786 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40