bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_0100_orf2
Length=145
Score E
Sequences producing significant alignments: (Bits) Value
At2g44580_1 32.0 0.41
CE18037 30.8 0.91
7302400 30.4 1.3
YPR125w 29.3 2.4
Hs13129096 29.3 2.4
CE18230 28.9 3.9
Hs22047498 27.3 9.5
> At2g44580_1
Length=359
Score = 32.0 bits (71), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query 16 SSTRQFAALLPDA-EERRAFVQGMLLSPLRGFFIAVEGQLLMLPAAELPLTLRERLVAAF 74
S ++ +PD EER ++G +L+ I +E ++ LP T ER F
Sbjct 289 SFMEEWKKKIPDGMEERFEMLEGEVLTEK----IGIETRVYTFSVRSLPSTPEERFSVLF 344
Query 75 ATKTVWREEELQPFL 89
++ W ++L+P+L
Sbjct 345 KHRSKWEWKDLEPYL 359
> CE18037
Length=517
Score = 30.8 bits (68), Expect = 0.91, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 0/33 (0%)
Query 57 LPAAELPLTLRERLVAAFATKTVWREEELQPFL 89
L +LP T++ER++ F + +W E+L+P+
Sbjct 451 LSPEDLPDTIKERMLYLFEYRKLWSMEQLRPYF 483
> 7302400
Length=393
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 0/28 (0%)
Query 62 LPLTLRERLVAAFATKTVWREEELQPFL 89
LP + +R+ A F TK W EE++P++
Sbjct 365 LPTNISDRMRALFKTKKRWTMEEMEPYI 392
> YPR125w
Length=454
Score = 29.3 bits (64), Expect = 2.4, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 0/49 (0%)
Query 41 SPLRGFFIAVEGQLLMLPAAELPLTLRERLVAAFATKTVWREEELQPFL 89
S L G I + +LLM AA PLT RE L T+ + R FL
Sbjct 96 SKLLGLEIKISSKLLMKSAAGYPLTRRENLQLKRTTQDIVRLVPFAAFL 144
> Hs13129096
Length=393
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query 54 LLMLPAAELPLTLRERLVAAFATKTVWREEELQPFL-SLC 92
+ +L +LP +ER + F+ + W EE++ P++ LC
Sbjct 322 IFLLKVDDLPEDNQERFNSLFSLREKWTEEDIAPYIQDLC 361
> CE18230
Length=490
Score = 28.9 bits (63), Expect = 3.9, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 0/37 (0%)
Query 12 SGGSSSTRQFAALLPDAEERRAFVQGMLLSPLRGFFI 48
S GSSSTR L PDAE R ++S L+ F+
Sbjct 190 SDGSSSTRGNPQLDPDAERRDDEEMDKIISDLKHLFV 226
> Hs22047498
Length=335
Score = 27.3 bits (59), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 0/65 (0%)
Query 3 AAASVASAXSGGSSSTRQFAALLPDAEERRAFVQGMLLSPLRGFFIAVEGQLLMLPAAEL 62
AS A SG + S F+ L +A+E FV G +L G F+A++ +L + +
Sbjct 159 GGASGADTNSGVTVSKSVFSTGLTEADEASVFVVGTVLYRNLGSFLALQRNTTVLNSKVI 218
Query 63 PLTLR 67
+T++
Sbjct 219 SVTVK 223
Lambda K H
0.319 0.132 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1712413322
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40